Goofs

• When Bane is talking to Neo while holding the knife to Trinity's throat, the blood appears and disappears on her throat.
• When Neo is talking to the Oracle the magnetic letters on the refrigerator behind him disappear then reappear.
• Obvious stunt double When Neo is punched into the wall by the train man.
• As the Hammer is reaching the gate to Zion, the hovercraft's gravity pads (glowing pods) switch between being damaged and fully functional. In addition, all of the aft pads were damaged at one point and the hovercraft was seen dragging the tail end on the tunnel. However, once the ship reached the gate, all pads, including the damaged rear pads, were shown to be fully functional.
• When Neo is talking to the Oracle, she sits down and slips her bracelet over her wrist. When we cut back to her, she puts on the bracelet again.
• When Seraph is trying to get out of the building with Sati, he takes her into a corridor, where the lights go out and they are left in pitch blackness. After trying a few doors in the dark hallway, he forces one open. We cut to a view inside the room they just burst into, and there is light in the corridor behind them.
• When Seraph and sati are looking for a place to hide from the Smiths, Seraph breaks in the door, he then swings the door closed and we see and hear it latch even though he just broke it.
• When the Logos passes above the cloud layer and the sun is visible forward from the cockpit, in the next shot, the moon is visible behind the Logos, but it is illuminated as if the sun was behind it.
• When Neo bids goodbye to Morpheus the plugs on the back of Neo's neck keep disappearing and reappearing